PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0068s0570.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 251aa    MW: 26601.5 Da    PI: 7.7805
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0068s0570.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.71.9e-1583131255
                     AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                              ++G+r +  +g+Wv+eIr+p++   ++r++lg++ t+e+Aa a++ a+++l+g
  SapurV1A.0068s0570.1.p  83 SFRGIRLR--SGKWVSEIREPRK---TTRVWLGTYPTPEMAATAYDVAALALKG 131
                             699**976..5*********843...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.7E-1082131IPR001471AP2/ERF domain
CDDcd000186.84E-2682141No hitNo description
PROSITE profilePS5103219.61283139IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-2583141IPR001471AP2/ERF domain
SMARTSM003801.3E-2783145IPR001471AP2/ERF domain
SuperFamilySSF541713.14E-1784141IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MANREPRADQ LPPLPSPILI PSPASSSGQP FDSRREHSTR LVRSPIGFSS QPVSGRQGDQ  60
SPRRPIRSPG GSSAQPTSGR HPSFRGIRLR SGKWVSEIRE PRKTTRVWLG TYPTPEMAAT  120
AYDVAALALK GPDTPLNFPE SILSYPIPAS ASPGDIRAAA ASAASGRSSQ RGRGPRPELG  180
QPETEGTSSS ITADAQSGQE IFDEEELLNM PNLLVDMAGG MLVSPPRINT PSSDDHSPGS  240
SDAESLWSYP *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1559360.0EF155936.1 Populus trichocarpa TINY-like protein (TINYL17) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002321876.11e-130hypothetical protein POPTR_0015s13840g
SwissprotQ9FJ902e-51ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLB9ID121e-130B9ID12_POPTR; Uncharacterized protein
STRINGPOPTR_0015s13840.11e-130(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-36ERF family protein